Skip to main content
Enterprise AI Analysis: Enhancing Surgical Planning with AI-Driven Segmentation and Classification of Oncological MRI Scans

Cella Medical Solutions • Medical Imaging AI

Enhancing Surgical Planning with AI-Driven Segmentation and Classification of Oncological MRI Scans

Cella Medical Solutions has developed an AI-driven pipeline for patient-specific 3D reconstruction from oncological MRI, significantly enhancing surgical planning. The system integrates automatic MRI sequence classification (ResNet-based, >90% accuracy) and anatomical segmentation (modular nnU-Net v2). This leads to improved Dice scores for critical structures (e.g., hepatic vasculature, pancreas, musculoskeletal) compared to prior methods. The entire process for a full MRI case takes approximately four minutes. This innovation translates voxel-wise labels into navigable 3D models, offering a robust, personalized, and sequence-aware approach to medical image analysis for enhanced clinical utility.

Executive Impact: At a Glance

This AI pipeline offers transformative benefits for healthcare providers and patients: significantly reducing manual processing time, improving diagnostic accuracy for complex oncological cases, and enabling more precise surgical planning. The rapid processing (approx. 4 mins/case) drastically increases workflow efficiency, while superior segmentation (e.g., 20-22% Dice score improvement for hepatic vasculature) minimizes surgical risks and enhances patient outcomes. By providing detailed 3D models, Cella empowers surgeons with unparalleled anatomical insight, leading to personalized and safer interventions.

0 MRI Classification Accuracy
0 Processing Time per MRI Case
0 Dice Score Improvement (Vascular)

Deep Analysis & Enterprise Applications

Select a topic to dive deeper, then explore the specific findings from the research, rebuilt as interactive, enterprise-focused modules.

MRI Sequence Classification
Anatomical Segmentation
Clinical Integration & Validation
96% Overall T1/T2 Classification Accuracy

Enterprise Process Flow

MRI Volume Input
ResNet18 Classification (T1/T2)
Route to Specific Segmentation Network
nnU-Net Segmentation
3D Model Reconstruction
Classification Performance Across Training Stages Description
Analysis The classification model progressively improved with dataset expansion and epoch refinement.
Benefits (Pros)
  • Initial Stage: 90% accuracy (363 volumes)
  • Second Stage: 96% accuracy (2286 volumes, 100 epochs)
  • Third Stage: 97% accuracy (2286 volumes, 200 epochs)
Limitations (Cons)
  • Initial stage showed imbalance: lower recall for T1-weighted images (0.83).
  • Misclassifications often linked to low-contrast regions, artifacts, or noise.
  • Need for robust features against non-ideal acquisition scenarios.
0.7265 Macro-Average Dice for T1 Vascular Segmentation
Vascular Segmentation: Sequence-Specific vs. General Description
Analysis Sequence-specific networks significantly enhance segmentation accuracy for vascular structures.
Benefits (Pros)
  • T1-specific network: highest overall performance for arterial (Dice 0.8052) and venous (Dice 0.7865) structures.
  • T2-specific network: strong performance for venous system (Dice 0.7904).
  • Specialized networks capture distinct contrast characteristics better.
Limitations (Cons)
  • Combined MR network: moderate results across all structures.
  • Increased computational cost and complexity for specialized models.
  • Smaller datasets for specialized networks may limit generalization.

Abdominal Organ Segmentation Breakthrough

Challenge: Accurately segmenting diverse abdominal organs with varying sizes and morphological complexities (e.g., liver, pancreas, bile duct, tumors) from heterogeneous MRI data.

Solution: Developed modular nnU-Net models trained on combined T1/T2 datasets, leveraging a label imbalance strategy to maximize dataset utilization with partially annotated cases.

Outcome: Achieved strong performance for large, well-defined organs (liver, spleen, kidneys > 0.85 Dice). The combined MR network achieved the highest macro Dice of 0.678 across all abdominal organs, demonstrating superior robustness and generalization across a wide range of anatomical structures.

Musculoskeletal Segmentation: T2-weighted Dominance Description
Analysis T2-weighted acquisitions prove superior for delineating osseous structures due to contrast characteristics.
Benefits (Pros)
  • T2-specific network achieved highest macro Dice (0.7544) for musculoskeletal structures.
  • T2 excels in segmenting osseous structures (pelvis ~0.77, spine ~0.80, femurs ~0.88 Dice).
  • T2 contrast is beneficial for cortical bone and surrounding connective tissue.
Limitations (Cons)
  • MR- and T1-based networks showed moderate performance for spine segmentation (<0.63 Dice).
  • Performance for smaller muscular structures (rectus abdominis, pyramidal) more variable, affected by structural variability and annotation quality.
7.2 Mean Qualitative Score (General Network)

Qualitative Validation by Expert Radiologists

Challenge: Assess the clinical applicability, anatomical fidelity, and interpretability of the AI-generated segmentations by experienced medical professionals in unseen clinical cases.

Solution: Eight independent MRI studies (4 T1w, 4 T2w) were segmented using TotalSegmentator (SOTA), General Network (combined T1/T2), and Specific Network (modality-specific). A blinded radiologist scored fidelity and interpretability (0-10 scale).

Outcome: Proposed networks significantly outperformed SOTA (General Network mean 7.2, Specific Network mean 6.9, SOTA mean 3.6). Specific Network showed highest median (7.8), indicating superior fidelity and clinical usefulness despite being trained on fewer cases. Segmented models successfully integrated into Cella's 3D Planner for interactive visualization.

Advanced ROI Calculator

Estimate your potential cost savings and efficiency gains by integrating AI into your medical imaging workflow.

Annual Cost Savings $0
Annual Hours Reclaimed 0

Your AI Implementation Roadmap

Our proven methodology ensures a smooth and effective integration of AI into your existing infrastructure.

Phase 1: Discovery & Strategy

Initial consultation to understand your unique challenges, data landscape, and strategic objectives. Define clear KPIs and a tailored AI adoption strategy.

Phase 2: Data Preparation & Model Training

Securely integrate and preprocess your medical imaging data. Custom model training and fine-tuning based on your specific anatomical targets and sequences.

Phase 3: Integration & Validation

Seamless API integration into your existing PACS/surgical planning systems. Rigorous clinical validation and performance testing with your expert radiologists.

Phase 4: Deployment & Optimization

Full-scale deployment of the AI pipeline. Continuous monitoring, performance optimization, and ongoing support to ensure maximum clinical utility and ROI.

Ready to Transform Your Surgical Planning?

Partner with Cella Medical Solutions to implement cutting-edge AI for superior diagnostic accuracy and personalized patient care.

Ready to Get Started?

Book Your Free Consultation.

Let's Discuss Your AI Strategy!

Lets Discuss Your Needs


AI Consultation Booking